Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902668.1_cds_XP_016452706.1_46914
CDS Infomation

[gene=LOC107777233] [db_xref=GeneID:107777233] [protein=AAA-ATPase At3g50940-like] [protein_id=XP_016452706.1] [location=join(5672..6739,6877..7317)] [gbkey=CDS]
Sequence

ATGATTTCAAGTGTTCTTTCTGATATTAACATGCCATCAGCCAGAACGATCATTTCTTCC
ACAGCTTCCATAGCTGCTACAGCCATGGTGGTTCGGTCCGTAGCCCGAGACCTAATCCCT
TATGAACTCCAACATTATGTTTACTTGAGCATCCGTGGCTTCTTCAAATCATTTTCTTCT
GAAATGGTTTTGATCATTGAAGAATTTGATGGACTAGCCAGCAACCAAATCTATAAGGCT
GCTGAAGTCTATTTAGGCACCAAGGTTTCCATTTCTGCTGGTAGCTTCAGAGTGAGTATG
CCAGAGAAAGAGACTAAGATATCCACCTTGGTAGCCAAAGACCAAGTGGTGTTGGATAAG
TTTAATGGTATTCAGTTCAAATGGAGGCAAGTTACTAGGCAGGTTCAATCCAAGAGGACC
AATTACCCTGGTCAATCTTCTACTCAGTCCGAACTTCGGTACTTTGAGCTATGCTTTCAC
AAGAAATACAAGAATATGGTATTTGAATCCTATTTCCCTTTAGTCATCAACGAGTCAAAC
AAGGCTAAAGAAGAGAGGAAGACCCTCCAAATTTATACTATGAATAATGAACACATGAGG
AGATACTCATACAATTCAGGAGATTATACATGGAACTCCATCAAGCTAGATCATCCTGCA
ACTTTTGACACATTGGCTATGGACAGAGAGCTCAAGGAAATGATTGTCTGCGATTTGGAC
AGATTTGTTAGAAGAAGGGATTTCTACAAGAAAGTTGGCAAGGCATGGAAACGTGGGTAC
TTGTTATATGGTCCTCCGGGGACTGGGAAATCAAGTTTGATAGCAGCCATGGCTAATTAC
CTTAACTTTGATATATATGATCTGGAGCTAACTGATATACGTGCAAATTCAGACCTTAGG
AGAGTCCTACTTTCCACAGGAAACAGATCAATCCTAGTCGTGGAAGACATTGACTGCAGC
CTCGATATTGAAGATCGCAAAGCAGAAGAACAGACTTTGAAGGCACTCAAACCTCATATA
ACGCAAGCTCAAACTATAAATATAGTTAGGAAGCCAAAACCTCAGGAGGTTACGTTATCA
GGGTTGCTAAACTTCATAGATGGGTTGTGGTCAAGCTGTGGAGACGAGAGGATAATAGTG
TTTACGACGAATCACAAAGACAGGTTGGATCCTGCCCTGTTGAGGCCAGGCAGAATGGAT
GTGCACATCCACATGTCCTATTGCACTCCTTGTGCTTTCAAGACATTGGCTTGGAATTAT
CTTGGAATTGAGGACCATCCTCTTTTCCCTGAAATCCTTGATCTTTTAGACGAGGCAATG
GTGACCCCTGCTGAAGTGGGTGAGCAATTGCTAAGGAATGAAGGGGTCGAGACTGCTTTG
AGCAGTCTCCTTGATTTCATCTACAAGAAAAAGAAAAAAGCTGATGAAATCAAGGCAAAA
GGTCTGGAAAATGAAGAAACCGAGGGAAAATTAGTTGTTGTGATTTCTCAAGGAGTAAAT
TACGATTAA

Peptide Sequence

PEP ID

XP_016452706.1
PEP Infomation

PREDICTED: AAA-ATPase At3g50940-like [Nicotiana tabacum]
Sequence

MISSVLSDINMPSARTIISSTASIAATAMVVRSVARDLIPYELQHYVYLSIRGFFKSFSS
EMVLIIEEFDGLASNQIYKAAEVYLGTKVSISAGSFRVSMPEKETKISTLVAKDQVVLDK
FNGIQFKWRQVTRQVQSKRTNYPGQSSTQSELRYFELCFHKKYKNMVFESYFPLVINESN
KAKEERKTLQIYTMNNEHMRRYSYNSGDYTWNSIKLDHPATFDTLAMDRELKEMIVCDLD
RFVRRRDFYKKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDIYDLELTDIRANSDLR
RVLLSTGNRSILVVEDIDCSLDIEDRKAEEQTLKALKPHITQAQTINIVRKPKPQEVTLS
GLLNFIDGLWSSCGDERIIVFTTNHKDRLDPALLRPGRMDVHIHMSYCTPCAFKTLAWNY
LGIEDHPLFPEILDLLDEAMVTPAEVGEQLLRNEGVETALSSLLDFIYKKKKKADEIKAK
GLENEETEGKLVVVISQGVNYD

Transcript Sequence

Gene sequence data has not been registered.